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Dynamic Programming Applications in Machine Learning and Genomics
Intermediate
Online
4 Weeks
Free Quick Facts
| Medium Of Instructions | Mode Of Learning | Mode Of Delivery |
|---|---|---|
| English | Self Study | Video and Text Based |
Courses and Certificate Fees
| Fees Informations | Certificate Availability | Certificate Providing Authority |
|---|---|---|
| INR 12594 | yes | UC San Diego |
The Syllabus
- Welcome!
- The Art of Computational Problem Formulation
- A Short Biological Intro
- Lectures (Optional)
- Interactive Text (Powered by Stepik)
- Programming Challenge 1-1: Minimum Number of Coins to Make Change
- Programming Challenge 1-2: Length of a Longest Path in a Grid
- Programming Challenge 1-3: Longest Common Subsequence of Two Strings
- Programming Challenge 1-4: Longest Path in a DAG
- Lectures (Optional)
- Interactive Text (Powered by Stepik)
- Programming Challenge 1-5: Global Alignment
- Programming Challenge 1-6: Local Alignment
- Programming Challenge 1-7: Edit Distance
- Programming Challenge 1-8: Fitting Alignment
- Programming Challenge 1-9: Overlap Alignment
- Programming Challenge 1-10: Alignment with Affine Gap Penalties
- Programming Challenge 1-11: Middle Edge in Alignment Graph
- Programming Challenge 1-12: Global Alignment in Linear Space
- Programming Challenge 1-13: Multiple Alignment
- Lectures (Optional)
- Interactive Text (Powered by Stepik)
- Programming Challenge 1-14: Probability of a Path in an HMM'
- Programming Challenge 1-15: Probability of an Outcome Given a Hidden Path
- Programming Challenge 1-16: Finding an Optimal Hidden Path
- Programming Challenge 1-17: Likelihood of an Outcome
- Lectures (Optional)
- Interactive Text (Powered by Stepik)
- Programming Challenge 1-18: Constructing a Profile HMM
- Programming Challenge 1-19: Profile HMM with Pseudocounts
- Programming Challenge 1-20: Sequence Alignment with a Profile HMM
- Programming Challenge 1-21: HMM Parameter Estimation
- Programming Challenge 1-22: HMM Parameter Estimation with Viterbi Learning
- Programming Challenge 1-23: Soft Decoding
- Programming Challenge 1-24: Baum-Welch Learning